For the first itteration I plan to use modified stock manifolds since they're so easy to weld. I have a couple sets of non-EGR truck manifolds that look like they're work ok down/forward and then turn them up so the turbos are sitting at the front corners of the engine. They'll be in basically the same location as the Crapice, only turned so the DP is aimed straight back. The idea is to have the least amount of hot plumbing visible in the engine bay.
I also just picked up a set of Camaro LS3 manifolds that are looking pretty promising. They are almost symetrical, and turn down right after the log. I'll fit them on a spare 4.8 tonight, but I'm hoping I can run them down/forward and 180* the pipe back up to the top. The biggest problem I can forsee is interference with the AC and/or the water pump fittings... but the water pump can be modified easy enough.
What manifolds are you thinking of using?